Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0f1 subunit c | ALQ79_04169 | Not Available | Positive | 174213 - 174470 | 8609.06 |
| atp synthase subunit b | ALQ79_04170 | Not Available | Positive | 174528 - 174998 | 16942.4 |
| atp synthase subunit delta | ALQ79_04171 | Not Available | Positive | 175011 - 175547 | 19342.2 |
| atp synthase subunit alpha | ALQ79_04172 | Not Available | Positive | 175569 - 177113 | 55343.4 |
| atp synthase gamma chain | ALQ79_04173 | Not Available | Positive | 177164 - 178024 | 31396.1 |
| atp synthase subunit beta | ALQ79_04174 | Not Available | Positive | 178052 - 179431 | 49495.2 |
| atp synthase epsilon chain | ALQ79_04175 | Not Available | Positive | 179476 - 179901 | 14746.8 |
| bifunctional protein glmu | ALQ79_04176 | Not Available | Positive | 180072 - 181394 | 46945.3 |
| deor family transcriptional regulator | ALQ79_04177 | Not Available | Positive | 181658 - 182464 | 29593.7 |
| glutamine--fructose-6-phosphate aminotransferase | ALQ79_04178 | Not Available | Positive | 182474 - 184309 | 66384.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







