Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_100775 | Not Available | Negative | 3306452 - 3306742 | 10286.0 |
| glycine cleavage system transcriptional repressor | ALQ79_02219 | Not Available | Positive | 3306644 - 3307207 | 20688.6 |
| ahpc/tsa protein | ALQ79_02220 | Not Available | Positive | 3307217 - 3307690 | 17431.7 |
| perm family membrane protein | ALQ79_02221 | Not Available | Negative | 3307745 - 3308818 | 39516.4 |
| tpr domain-containing protein | ALQ79_02222 | Not Available | Positive | 3309243 - 3310676 | 53239.8 |
| quinolinate synthase a | ALQ79_02223 | Not Available | Negative | 3310728 - 3311786 | 38672.5 |
| polygalacturonase | ALQ79_02224 | Not Available | Positive | 3312181 - 3313779 | 56155.0 |
| chromosome partitioning related protein | ALQ79_05024 | Not Available | Positive | 3314099 - 3314298 | 6977.51 |
| snf2-like protein | ALQ79_05001 | Not Available | Negative | 3314795 - 3315542 | 28433.3 |
| hypothetical protein | ALQ79_03053 | Not Available | Negative | 3316118 - 3316306 | 7206.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







