Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ice nucleation protein | ALQ79_01972 | Not Available | Positive | 3286758 - 3288722 | 64797.2 |
| putative m18 family aminopeptidase 2 | ALQ79_04957 | Not Available | Negative | 3288975 - 3290276 | 47335.2 |
| pseudouridine synthase | ALQ79_01974 | Not Available | Negative | 3290930 - 3291565 | 23791.5 |
| cell division topological specificity factor | ALQ79_01975 | Not Available | Negative | 3291656 - 3291910 | 9676.59 |
| site-determining protein | ALQ79_01976 | Not Available | Negative | 3291910 - 3292722 | 29450.5 |
| putative septum site-determining protein minc | ALQ79_04959 | Not Available | Negative | 3292954 - 3293814 | 30732.7 |
| lipid a biosynthesis lauroyl acyltransferase | ALQ79_04958 | Not Available | Positive | 3293800 - 3294747 | 36206.0 |
| patatin protein | ALQ79_01978 | Not Available | Positive | 3294781 - 3295962 | 42315.1 |
| hypothetical protein | ALQ79_01979 | Not Available | Negative | 3296224 - 3297081 | 32929.8 |
| dihydrodipicolinate synthetase protein | ALQ79_01980 | Not Available | Negative | 3297081 - 3297878 | 29293.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







