Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_100773 | Not Available | Positive | 3259125 - 3259379 | 9478.41 |
| marr family transcriptional regulator | ALQ79_00920 | Not Available | Positive | 3259658 - 3260110 | 16068.4 |
| hypothetical protein | ALQ79_00921 | Not Available | Positive | 3260107 - 3262194 | 77657.1 |
| hlyd family secretion protein | ALQ79_101379 | Not Available | Positive | 3262316 - 3263281 | 35902.0 |
| nodt family outer membrane efflux lipoprotein | ALQ79_00922 | Not Available | Positive | 3263278 - 3264711 | 51571.1 |
| ribosomal protein alanine acetyltransferase | ALQ79_04696 | Not Available | Negative | 3264732 - 3265298 | 21372.4 |
| ion transport protein | ALQ79_00924 | Not Available | Positive | 3265696 - 3266529 | 31065.7 |
| sulfate abc transporter periplasmic sulfate-binding protein | ALQ79_100556 | Not Available | Positive | 3266568 - 3267632 | 39319.7 |
| lipoprotein | ALQ79_00925 | Not Available | Negative | 3267692 - 3268099 | 14328.7 |
| cytochrome c-type bioproteinsis protein | ALQ79_00926 | Not Available | Negative | 3268111 - 3269292 | 42265.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







