Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative alpha-l-glutamate ligase | ALQ79_05398 | Not Available | Negative | 3247641 - 3248705 | 38192.8 |
| ribosomal protein s6 modification protein | ALQ79_03632 | Not Available | Negative | 3248543 - 3249019 | 17498.3 |
| cyclic diguanylate phosphodiesterase domain-containing protein | ALQ79_100045 | Not Available | Negative | 3249036 - 3249845 | 30162.9 |
| heat shock protein 15 | ALQ79_03633 | Not Available | Positive | 3249989 - 3250396 | 15172.0 |
| 33 kda chaperonin | ALQ79_05399 | Not Available | Positive | 3250568 - 3251470 | 33201.4 |
| phosphoenolpyruvate carboxykinase | ALQ79_03634 | Not Available | Positive | 3251650 - 3253194 | 55831.1 |
| oxidoreductase, molybdopterin binding protein | ALQ79_00916 | Not Available | Negative | 3254122 - 3254892 | 29242.0 |
| hypothetical protein | ALQ79_00917 | Not Available | Negative | 3255582 - 3256187 | 20853.9 |
| heavy metal sensor histidine kinase | ALQ79_00918 | Not Available | Positive | 3257026 - 3258414 | 51316.3 |
| alginate lyase | ALQ79_00919 | Not Available | Negative | 3258434 - 3259102 | 24818.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







