Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_01267 | Not Available | Negative | 3219498 - 3220592 | 39915.8 |
| hypothetical protein | ALQ79_01268 | Not Available | Negative | 3220585 - 3221343 | 28035.3 |
| hypothetical protein | ALQ79_01269 | Not Available | Negative | 3221336 - 3222469 | 40482.3 |
| trypsin domain-containing protein | ALQ79_04787 | Not Available | Negative | 3222536 - 3223717 | 41986.9 |
| hypothetical protein | ALQ79_04788 | Not Available | Negative | 3223730 - 3224800 | 39514.0 |
| hypothetical protein | ALQ79_01272 | Not Available | Positive | 3224848 - 3225393 | 20759.2 |
| putative polysaccharide biosynthesis protein | ALQ79_100406 | Not Available | Negative | 3225443 - 3226729 | 46527.1 |
| lysr family transcriptional regulator | ALQ79_03613 | Not Available | Positive | 3228277 - 3229026 | 27874.8 |
| taurine catabolism dioxygenase | ALQ79_100835 | Not Available | Negative | 3228980 - 3229942 | 36729.2 |
| hypothetical protein | ALQ79_03614 | Not Available | Negative | 3230078 - 3231322 | 43721.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







