Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l34 | ALQ79_04161 | Not Available | Positive | 163899 - 164033 | 5124.46 |
| ribonuclease p protein component | ALQ79_04162 | Not Available | Positive | 164002 - 164451 | 17011.6 |
| membrane protein insertase yidc | ALQ79_05521 | Not Available | Positive | 164689 - 166383 | 62048.3 |
| trna modification gtpase mnme | ALQ79_04164 | Not Available | Positive | 166462 - 167832 | 48883.3 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme mnmg | ALQ79_04165 | Not Available | Positive | 168406 - 170301 | 69420.1 |
| ribosomal rna small subunit methyltransferase g | ALQ79_04166 | Not Available | Positive | 170298 - 170942 | 23835.7 |
| chromosome partitioning protein para | ALQ79_04167 | Not Available | Positive | 170961 - 171752 | 28863.1 |
| chromosome partitioning protein parb | ALQ79_100091 | Not Available | Positive | 171762 - 172634 | 32105.9 |
| f0f1 atp synthase, f0 subunit i | ALQ79_100117 | Not Available | Positive | 172745 - 173188 | 16149.5 |
| atp synthase subunit a | ALQ79_04168 | Not Available | Positive | 173205 - 174074 | 31760.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







