Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanosine-3,5-bis 3-pyrophosphohydrolase | ALQ79_04783 | Not Available | Positive | 3150570 - 3152693 | 79229.2 |
| putative endoribonuclease l-psp | ALQ79_01226 | Not Available | Positive | 3152718 - 3153098 | 13375.2 |
| putative lipoprotein | ALQ79_01227 | Not Available | Positive | 3153153 - 3153890 | 26537.2 |
| actc protein | ALQ79_100535 | Not Available | Negative | 3153942 - 3154808 | 31564.4 |
| tonb system transport protein exbb1 | ALQ79_01228 | Not Available | Positive | 3155000 - 3155953 | 33440.9 |
| ferric siderophore uptake system, exbd/tolr protein | ALQ79_01229 | Not Available | Positive | 3155957 - 3156382 | 15327.7 |
| ferric siderophore transporter, periplasmic energy transduction protein tonb | ALQ79_01230 | Not Available | Positive | 3156379 - 3157125 | 26831.8 |
| oxidative stress regulatory protein oxyr | ALQ79_01231 | Not Available | Positive | 3157218 - 3158141 | 33553.7 |
| atp-dependent dna helicase recg | ALQ79_01232 | Not Available | Positive | 3158153 - 3160228 | 76066.4 |
| hypothetical protein | ALQ79_01233 | Not Available | Positive | 3160315 - 3161712 | 51556.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







