Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | ALQ79_02187 | Not Available | Positive | 3130176 - 3130877 | 25548.6 |
| hydroxyglutarate oxidase | ALQ79_02188 | Not Available | Positive | 3130946 - 3132139 | 43131.0 |
| major facilitator family transporter | ALQ79_02189 | Not Available | Positive | 3132168 - 3133526 | 48131.6 |
| pbsx family transcriptional regulator | ALQ79_05012 | Not Available | Negative | 3133774 - 3134181 | 15208.6 |
| transcriptional regulator | ALQ79_01209 | Not Available | Positive | 3135770 - 3136138 | 13606.8 |
| 50s ribosomal protein l33 | ALQ79_01210 | Not Available | Negative | 3136220 - 3136375 | 5974.36 |
| 50s ribosomal protein l28 | ALQ79_01211 | Not Available | Negative | 3136387 - 3136620 | 8936.03 |
| solute-binding family 5 protein | ALQ79_01212 | Not Available | Positive | 3136985 - 3138571 | 58242.2 |
| dna repair protein radc | ALQ79_100166 | Not Available | Negative | 3138695 - 3139369 | 24991.4 |
| phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase | ALQ79_01213 | Not Available | Positive | 3139436 - 3140713 | 45506.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







