Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein-dependent malic enzyme | ALQ79_04932 | Not Available | Negative | 3074983 - 3076704 | 63530.8 |
| putative gas vesicle protein | ALQ79_101594 | Not Available | Negative | 3076986 - 3077516 | 19371.8 |
| hypothetical protein | ALQ79_01871 | Not Available | Positive | 3077725 - 3077985 | 9739.7 |
| plasmid stabilization system protein | ALQ79_100402 | Not Available | Positive | 3077963 - 3078274 | 11711.0 |
| hypothetical protein | ALQ79_01872 | Not Available | Negative | 3078603 - 3078899 | 10621.7 |
| hypothetical protein | ALQ79_05171 | Not Available | Positive | 3079046 - 3079450 | 15355.5 |
| prolipoprotein diacylglyceryl transferase | ALQ79_03659 | Not Available | Positive | 3079692 - 3080504 | 30116.5 |
| thymidylate synthase | ALQ79_03660 | Not Available | Positive | 3080557 - 3081528 | 36664.9 |
| hypothetical protein | ALQ79_03661 | Not Available | Positive | 3081606 - 3081803 | 7221.79 |
| hypothetical protein | ALQ79_03662 | Not Available | Positive | 3081807 - 3082703 | 32819.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







