Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine/dap/arginine decarboxylase family decarboxylase 2 | ALQ79_01349 | Not Available | Positive | 132819 - 133982 | 43348.0 |
| hypothetical protein | ALQ79_01350 | Not Available | Negative | 134207 - 135235 | 38032.8 |
| hypothetical protein | ALQ79_01351 | Not Available | Negative | 135207 - 136451 | 46061.3 |
| sulfite reductase flavoprotein, alpha-component | ALQ79_01352 | Not Available | Positive | 136797 - 139319 | 93008.3 |
| peptide abc transporter, atp-binding protein | ALQ79_01353 | Not Available | Negative | 139425 - 140399 | 35798.5 |
| dipeptide abc transporter atp-binding protein | ALQ79_01354 | Not Available | Negative | 140399 - 141367 | 34786.6 |
| dipeptide abc transporter, permease protein | ALQ79_01355 | Not Available | Negative | 141378 - 142289 | 32533.8 |
| dipeptide abc transporter, permease protein | ALQ79_01356 | Not Available | Negative | 142300 - 143310 | 36927.3 |
| dipeptide-binding abc transporter, periplasmic substrate-binding component | ALQ79_04810 | Not Available | Negative | 143385 - 145058 | 62233.3 |
| oprd family outer membrane protein | ALQ79_01358 | Not Available | Negative | 145063 - 146442 | 50716.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







