Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen synthase | ALQ79_03335 | Not Available | Negative | 2975650 - 2977248 | 58489.8 |
| hypothetical protein | ALQ79_101229 | Not Available | Positive | 2977443 - 2977556 | 4124.13 |
| hypothetical protein | ALQ79_101151 | Not Available | Positive | 2977644 - 2977769 | 4689.69 |
| acetyltransferase, gnat family | ALQ79_03336 | Not Available | Positive | 2977877 - 2978374 | 18272.2 |
| hypothetical protein | ALQ79_03337 | Not Available | Negative | 2978533 - 2978706 | 6422.99 |
| 6-phosphogluconate dehydrogenase, decarboxylating | ALQ79_03338 | Not Available | Positive | 2979022 - 2979996 | 35049.6 |
| glucose-6-phosphate 1-dehydrogenase | ALQ79_03339 | Not Available | Positive | 2979996 - 2981528 | 56902.3 |
| had superfamily hydrolase | ALQ79_03340 | Not Available | Positive | 2981521 - 2982330 | 29451.1 |
| glycoside hydrolase protein | ALQ79_03341 | Not Available | Positive | 2982382 - 2984199 | 67319.1 |
| alpha-ketoglutarate-dependent dioxygenase alkb | ALQ79_03342 | Not Available | Negative | 2984200 - 2984886 | 25200.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







