Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium chelatase | ALQ79_03317 | Not Available | Positive | 2952460 - 2953488 | 36899.1 |
| magnesium chelatase subunit chld | ALQ79_03318 | Not Available | Positive | 2953566 - 2954153 | 21379.9 |
| hypothetical protein | ALQ79_100256 | Not Available | Negative | 2954249 - 2954647 | 14612.2 |
| sigma-54 dependent transcriptional regulator | ALQ79_03319 | Not Available | Positive | 2954842 - 2956167 | 48780.0 |
| nicotinamide mononucleotide transporter pnuc | ALQ79_03320 | Not Available | Negative | 2956686 - 2957249 | 20948.1 |
| undecaprenyl-diphosphatase | ALQ79_03321 | Not Available | Positive | 2957501 - 2958331 | 30503.8 |
| integral membrane protein | ALQ79_03322 | Not Available | Positive | 2958328 - 2958762 | 16354.6 |
| 3-oxoadipate enol-lactonase | ALQ79_03323 | Not Available | Positive | 2959240 - 2960031 | 28327.0 |
| lysr family transcriptional regulator | ALQ79_03324 | Not Available | Positive | 2960111 - 2961070 | 35315.6 |
| fmn-dependent proteinh-azoreductase | ALQ79_03325 | Not Available | Positive | 2961145 - 2961753 | 21695.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







