Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_01342 | Not Available | Positive | 124038 - 124346 | 11604.1 |
| peptidyl-prolyl cis-trans isomerase | ALQ79_04807 | Not Available | Positive | 124401 - 125117 | 25352.1 |
| hypothetical protein | ALQ79_01344 | Not Available | Negative | 125197 - 125439 | 9300.25 |
| peptide chain release factor 3 | ALQ79_01345 | Not Available | Negative | 125672 - 127255 | 59693.4 |
| hypothetical protein | ALQ79_100982 | Not Available | Positive | 127247 - 127588 | 12065.6 |
| binding-protein dependent transport system inner membrane protein | ALQ79_01346 | Not Available | Positive | 127600 - 128313 | 24788.6 |
| substrate-binding region of abc-type glycine betaine transport system | ALQ79_100405 | Not Available | Positive | 128328 - 129221 | 33167.7 |
| binding-protein dependent transport system inner membrane protein | ALQ79_01347 | Not Available | Positive | 129235 - 129888 | 22855.3 |
| l-proline/glycine/betaine abc transport atp-binding protein | ALQ79_100493 | Not Available | Positive | 129885 - 131042 | 43081.9 |
| f-box domain-containing protein | ALQ79_04808 | Not Available | Positive | 131333 - 132448 | 41626.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







