Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna synthetase, s-ii | ALQ79_04133 | Not Available | Positive | 2884952 - 2885530 | 21041.1 |
| transcriptional regulator, lysr protein | ALQ79_04134 | Not Available | Negative | 2885589 - 2886506 | 33749.5 |
| putative alcohol dehydrogenase | ALQ79_04135 | Not Available | Positive | 2886670 - 2887686 | 35830.0 |
| phosphoesterase | ALQ79_04136 | Not Available | Positive | 2887810 - 2888268 | 16537.8 |
| type vi secretion protein icmf | ALQ79_05515 | Not Available | Negative | 2888312 - 2891992 | 138101.0 |
| hypothetical protein | ALQ79_04138 | Not Available | Negative | 2891829 - 2892692 | 32693.2 |
| hypothetical protein | ALQ79_04139 | Not Available | Negative | 2892701 - 2894032 | 49500.4 |
| type vi secretion system protein vasd-2 | ALQ79_100709 | Not Available | Negative | 2894029 - 2894586 | 20618.9 |
| type 4 fimbriae expression regulatory protein pilr | ALQ79_04140 | Not Available | Negative | 2894851 - 2895807 | 35344.7 |
| clpb protein | ALQ79_05516 | Not Available | Negative | 2895794 - 2898388 | 94983.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







