Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | ALQ79_04123 | Not Available | Positive | 2875759 - 2876199 | 15990.7 |
| hypothetical protein | ALQ79_04124 | Not Available | Negative | 2876253 - 2876798 | 19156.2 |
| acetylornithine aminotransferase | ALQ79_04125 | Not Available | Negative | 2876923 - 2878125 | 43171.6 |
| lysr family transcriptional regulator | ALQ79_04126 | Not Available | Positive | 2878181 - 2879134 | 34797.2 |
| methyl-accepting chemotaxis protein | ALQ79_05513 | Not Available | Negative | 2879205 - 2881175 | 70745.1 |
| gaf domain-containing protein | ALQ79_04128 | Not Available | Positive | 2881330 - 2881833 | 18310.8 |
| bro domain-containing protein | ALQ79_04129 | Not Available | Positive | 2882226 - 2882765 | 21000.7 |
| hypothetical protein | ALQ79_04130 | Not Available | Negative | 2882832 - 2883068 | 8605.49 |
| taud/tfda family dioxygenase | ALQ79_04131 | Not Available | Negative | 2883161 - 2884027 | 31828.9 |
| acetyltransferase | ALQ79_05514 | Not Available | Positive | 2884133 - 2884642 | 18648.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







