Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aspartate aminotransferase | ALQ79_04115 | Not Available | Negative | 2864245 - 2864637 | 14838.9 |
| putative aspartate aminotransferase | ALQ79_102683 | Not Available | Negative | 2864559 - 2864846 | 10416.3 |
| putative oxidoreductase | ALQ79_04116 | Not Available | Negative | 2864843 - 2866264 | 50883.6 |
| putative abc transporter exported solute-binding protein | ALQ79_04117 | Not Available | Negative | 2866261 - 2867100 | 30644.8 |
| amino acid abc transporter periplasmic amino acid-binding protein | ALQ79_04118 | Not Available | Negative | 2867168 - 2868010 | 30464.4 |
| lysr family transcriptional regulator | ALQ79_04119 | Not Available | Positive | 2868234 - 2869124 | 33091.1 |
| radical sam domain-containing protein | ALQ79_04120 | Not Available | Positive | 2869196 - 2870416 | 45411.5 |
| phzf family phenazine biosynthesis protein | ALQ79_04121 | Not Available | Negative | 2871323 - 2872165 | 30177.1 |
| putative protein-dependent protein deacetylase | ALQ79_05508 | Not Available | Positive | 2872331 - 2873176 | 30679.7 |
| dna polymerase | ALQ79_05509 | Not Available | Negative | 2873173 - 2875536 | 89789.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







