Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mlta-interacting protein | ALQ79_05505 | Not Available | Positive | 2842398 - 2843216 | 29579.1 |
| dna-binding response regulator | ALQ79_04096 | Not Available | Positive | 2843268 - 2843969 | 26268.3 |
| sensor histidine kinase | ALQ79_04097 | Not Available | Positive | 2843966 - 2845279 | 48210.7 |
| c4-dicarboxylic acid, orotate and citrate transporte | ALQ79_04098 | Not Available | Negative | 2845351 - 2846721 | 48523.2 |
| 3-carboxy-cis,cis-muconate cycloisomerase | ALQ79_04099 | Not Available | Negative | 2846728 - 2848083 | 49120.0 |
| gntr family transcriptional regulator | ALQ79_04100 | Not Available | Positive | 2848201 - 2848944 | 27448.0 |
| l-arabinose transport system permease protein | ALQ79_04101 | Not Available | Negative | 2848985 - 2849974 | 34912.8 |
| arabinose import atp-binding protein arag | ALQ79_04102 | Not Available | Negative | 2849992 - 2851515 | 55614.6 |
| l-arabinose abc transporter periplasmic l-arabinose-binding protein | ALQ79_04103 | Not Available | Negative | 2851571 - 2852584 | 35950.2 |
| senescence marker protein-30 protein | ALQ79_04104 | Not Available | Negative | 2852771 - 2853643 | 31499.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







