Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion component | ALQ79_04086 | Not Available | Negative | 2832315 - 2832653 | 12550.2 |
| hypothetical protein | ALQ79_04087 | Not Available | Negative | 2832650 - 2833009 | 13399.0 |
| hypothetical protein | ALQ79_04088 | Not Available | Negative | 2833006 - 2833947 | 33835.7 |
| hypothetical protein | ALQ79_04089 | Not Available | Negative | 2834070 - 2834231 | 5600.56 |
| hypothetical protein | ALQ79_04090 | Not Available | Positive | 2834782 - 2838276 | 124307.0 |
| hypothetical protein | ALQ79_05503 | Not Available | Negative | 2838327 - 2839238 | 33272.9 |
| hypothetical protein | ALQ79_05504 | Not Available | Positive | 2839268 - 2839393 | 4973.22 |
| amino acid transporter | ALQ79_04092 | Not Available | Positive | 2839897 - 2840718 | 28828.2 |
| nadph nitroreductase protein | ALQ79_04093 | Not Available | Negative | 2840763 - 2841518 | 27051.1 |
| transcriptional regulator, tetr protein | ALQ79_04094 | Not Available | Positive | 2841589 - 2842230 | 23838.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







