Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ALQ79_04058 | Not Available | Negative | 2795679 - 2796569 | 32880.6 |
| aldehyde dehydrogenase protein | ALQ79_04059 | Not Available | Positive | 2796660 - 2798051 | 50054.9 |
| oxidoreductase | ALQ79_04060 | Not Available | Negative | 2798246 - 2798830 | 21749.9 |
| xanthine dehydrogenase accessory factor | ALQ79_04061 | Not Available | Negative | 2799563 - 2800531 | 33861.1 |
| aldehyde oxidase and xanthine dehydrogenase protein | ALQ79_04062 | Not Available | Negative | 2800534 - 2802750 | 79675.6 |
| oxidoreductase | ALQ79_04063 | Not Available | Negative | 2802760 - 2803743 | 35043.2 |
| oxidoreductase, iron-sulfur binding subunit | ALQ79_04064 | Not Available | Negative | 2803743 - 2804423 | 23674.2 |
| putative malate:quinone oxidoreductase | ALQ79_04065 | Not Available | Positive | 2805309 - 2806952 | 60011.8 |
| phytochrome:gaf:atp-binding region, atpase-like:histidine kinase a | ALQ79_04066 | Not Available | Positive | 2807297 - 2810308 | 109898.0 |
| response regulator | ALQ79_04067 | Not Available | Positive | 2810305 - 2810682 | 13657.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







