Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | ALQ79_04048 | Not Available | Positive | 2786435 - 2787187 | 28107.1 |
| mutt/nudix protein | ALQ79_04049 | Not Available | Positive | 2787189 - 2787752 | 21143.3 |
| hypothetical protein | ALQ79_04050 | Not Available | Negative | 2787804 - 2788094 | 10734.6 |
| bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase ii-like protein | ALQ79_05492 | Not Available | Positive | 2788123 - 2789298 | 42982.6 |
| extracellular solute-binding protein | ALQ79_04052 | Not Available | Positive | 2789583 - 2790614 | 37082.0 |
| binding-protein dependent transport system inner membrane protein | ALQ79_04053 | Not Available | Positive | 2790617 - 2791555 | 33872.6 |
| spermidine/putrescine abc transporter permease | ALQ79_04054 | Not Available | Positive | 2791562 - 2792377 | 29584.4 |
| spermidine/putrescine abc transporter atp-binding protein | ALQ79_04055 | Not Available | Positive | 2792374 - 2793528 | 41851.4 |
| lysr family transcriptional regulator | ALQ79_04056 | Not Available | Negative | 2793545 - 2794456 | 33824.6 |
| tartrate dehydrogenase | ALQ79_04057 | Not Available | Positive | 2794561 - 2795664 | 40650.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







