Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_04500 | Not Available | Positive | 2734528 - 2734716 | 6549.37 |
| hypothetical protein | ALQ79_04501 | Not Available | Positive | 2734815 - 2735039 | 8148.72 |
| hypothetical protein | ALQ79_04502 | Not Available | Positive | 2735092 - 2735343 | 9247.82 |
| c-5 cytosine-specific dna methylase | ALQ79_05613 | Not Available | Negative | 2735618 - 2736730 | 40580.8 |
| circadian clock protein kaic-like protein | ALQ79_04009 | Not Available | Positive | 2737095 - 2738579 | 54423.4 |
| sensory box histidine kinase/response regulator | ALQ79_100949 | Not Available | Positive | 2738576 - 2740606 | 74635.2 |
| response regulator | ALQ79_04010 | Not Available | Negative | 2740676 - 2741104 | 15405.1 |
| sensor histidine kinase/response regulator | ALQ79_04011 | Not Available | Negative | 2741198 - 2742379 | 44356.9 |
| protein-glutamate methylesterase cheb | ALQ79_100362 | Not Available | Negative | 2742373 - 2742990 | 22040.4 |
| chemotaxis protein methyltransferase cher | ALQ79_04012 | Not Available | Negative | 2742984 - 2743805 | 31407.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







