Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensory box histidine kinase | ALQ79_00544 | Not Available | Negative | 2703746 - 2704135 | 14162.7 |
| two-component sensor/regulator | ALQ79_04604 | Not Available | Negative | 2704120 - 2705850 | 63967.3 |
| sigma-54 dependent transcriptional regulator tyrr | ALQ79_00546 | Not Available | Negative | 2706022 - 2707530 | 54916.4 |
| hypothetical protein | ALQ79_00547 | Not Available | Negative | 2707817 - 2708173 | 13539.9 |
| hypothetical protein | ALQ79_101310 | Not Available | Negative | 2708272 - 2708400 | 4846.11 |
| heme oxygenase | ALQ79_00548 | Not Available | Negative | 2708727 - 2709341 | 22077.2 |
| tonb-dependent outer membrane heme receptor | ALQ79_04607 | Not Available | Negative | 2709459 - 2712038 | 93829.4 |
| regulatory protein | ALQ79_04608 | Not Available | Negative | 2712160 - 2713188 | 37706.9 |
| sigma-70 region 2 | ALQ79_100407 | Not Available | Negative | 2713185 - 2713748 | 21131.7 |
| glyceraldehyde-3-phosphate dehydrogenase | ALQ79_00551 | Not Available | Negative | 2713817 - 2714818 | 36245.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







