Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yd repeat-containing protein | ALQ79_00529 | Not Available | Positive | 2673878 - 2674627 | 27749.9 |
| hypothetical protein | ALQ79_00530 | Not Available | Negative | 2674671 - 2675114 | 16300.2 |
| dna polymerase iii subunit chi | ALQ79_00531 | Not Available | Negative | 2675122 - 2675550 | 16124.0 |
| putative cytosol aminopeptidase | ALQ79_100032 | Not Available | Negative | 2675607 - 2677211 | 56594.8 |
| putative membrane protein | ALQ79_00532 | Not Available | Positive | 2677417 - 2678544 | 41676.7 |
| putative permease | ALQ79_100122 | Not Available | Positive | 2678531 - 2679592 | 38519.4 |
| cold shock domain protein | ALQ79_00533 | Not Available | Negative | 2679737 - 2679949 | 7693.04 |
| aminomethyltransferase | ALQ79_100361 | Not Available | Negative | 2680362 - 2681537 | 42121.2 |
| glycine dehydrogenase | ALQ79_04600 | Not Available | Negative | 2681579 - 2684443 | 103589.0 |
| glycine cleavage system h protein | ALQ79_00535 | Not Available | Negative | 2684454 - 2684837 | 13920.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







