Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_200500 | Not Available | Negative | 2654094 - 2654429 | 12352.2 |
| hypothetical protein | ALQ79_04685 | Not Available | Positive | 2655338 - 2655511 | 6210.79 |
| hypothetical protein | ALQ79_00832 | Not Available | Negative | 2655639 - 2656526 | 31738.9 |
| oprd family outer membrane porin | ALQ79_00833 | Not Available | Positive | 2656787 - 2658043 | 46001.5 |
| 4-carboxymuconolactone decarboxylase | ALQ79_00834 | Not Available | Negative | 2658296 - 2658694 | 15009.0 |
| 3-carboxy-cis,cis-muconate cycloisomerase | ALQ79_00835 | Not Available | Negative | 2658691 - 2660052 | 49045.2 |
| 4-hydroxybenzoate transporter | ALQ79_00836 | Not Available | Negative | 2660077 - 2661426 | 47341.1 |
| protocatechuate 3,4-dioxygenase subunit alpha | ALQ79_100012 | Not Available | Negative | 2661513 - 2662115 | 22371.2 |
| protocatechuate 3,4-dioxygenase, beta subunit | ALQ79_100079 | Not Available | Negative | 2662127 - 2662969 | 31289.4 |
| transcriptional regulator | ALQ79_04686 | Not Available | Negative | 2662972 - 2663922 | 34591.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







