Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | ALQ79_100124 | Not Available | Negative | 2620494 - 2621180 | 27083.3 |
| hypothetical protein | ALQ79_00092 | Not Available | Negative | 2621177 - 2621572 | 14685.2 |
| isochorismatase protein | ALQ79_00093 | Not Available | Negative | 2621572 - 2622249 | 24073.0 |
| abc transporter atp-binding protein | ALQ79_00094 | Not Available | Negative | 2622246 - 2623781 | 55855.3 |
| formamidase | ALQ79_00095 | Not Available | Negative | 2624475 - 2625497 | 37442.7 |
| abc transporter permease | ALQ79_00096 | Not Available | Negative | 2625518 - 2626438 | 31712.4 |
| abc transporter permease | ALQ79_00097 | Not Available | Negative | 2626431 - 2627546 | 38365.2 |
| twin-arginine translocation pathway signal | ALQ79_00098 | Not Available | Negative | 2627550 - 2628659 | 39390.5 |
| allophanate hydrolase | ALQ79_00099 | Not Available | Negative | 2628675 - 2630492 | 64179.8 |
| hypothetical protein | ALQ79_00100 | Not Available | Negative | 2630730 - 2631110 | 14318.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







