Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_00058 | Not Available | Positive | 2577994 - 2578575 | 21199.9 |
| ggdef domain-containing protein | ALQ79_00059 | Not Available | Negative | 2578644 - 2580173 | 56927.3 |
| heavy metal sensor histidine kinase | ALQ79_00060 | Not Available | Negative | 2580382 - 2581746 | 50358.6 |
| dna-binding heavy metal response regulator | ALQ79_00061 | Not Available | Negative | 2581736 - 2582413 | 25233.7 |
| rnd efflux transporter | ALQ79_04513 | Not Available | Negative | 2582424 - 2585660 | 115651.0 |
| hlyd family secretion protein | ALQ79_00063 | Not Available | Negative | 2585525 - 2586691 | 41648.2 |
| hypothetical protein | ALQ79_04514 | Not Available | Positive | 2587168 - 2587362 | 6792.09 |
| fimbrial protein | ALQ79_00064 | Not Available | Positive | 2587670 - 2588254 | 19604.3 |
| pili assembly chaperone | ALQ79_00065 | Not Available | Positive | 2588285 - 2589079 | 29054.9 |
| outer membrane usher protein fimd | ALQ79_100893 | Not Available | Positive | 2589210 - 2591753 | 91626.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







