Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridine nucleotide-disulfide oxidoreductase protein | ALQ79_02946 | Not Available | Negative | 2549323 - 2550714 | 49392.4 |
| 2fe-2s iron-sulfur cluster binding protein | ALQ79_101496 | Not Available | Negative | 2550711 - 2551001 | 10360.6 |
| abc transporter permease | ALQ79_02947 | Not Available | Negative | 2551019 - 2551813 | 28791.0 |
| binding-protein dependent transport system inner membrane protein | ALQ79_02948 | Not Available | Negative | 2551817 - 2552689 | 31856.3 |
| abc transporter atp-binding protein | ALQ79_02949 | Not Available | Negative | 2552686 - 2553726 | 38042.1 |
| iclr family transcriptional regulator | ALQ79_02950 | Not Available | Positive | 2553956 - 2554795 | 30346.5 |
| putative methyl-accepting chemotaxis protein | ALQ79_02951 | Not Available | Negative | 2554810 - 2556432 | 58207.2 |
| methyltransferase | ALQ79_02952 | Not Available | Negative | 2556721 - 2557683 | 36218.6 |
| hypothetical protein | ALQ79_02953 | Not Available | Negative | 2557749 - 2558453 | 24957.5 |
| hypothetical protein | ALQ79_02954 | Not Available | Negative | 2558505 - 2558732 | 8456.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







