Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luciferase protein | ALQ79_05195 | Not Available | Positive | 2492237 - 2493337 | 40539.9 |
| hypothetical protein | ALQ79_102044 | Not Available | Negative | 2493195 - 2493500 | 11555.3 |
| hypothetical protein | ALQ79_102071 | Not Available | Negative | 2493543 - 2493644 | 3621.38 |
| ggdef domain-containing protein | ALQ79_02900 | Not Available | Positive | 2493673 - 2495256 | 58297.1 |
| acrb/acrd/acrf family transporter | ALQ79_02901 | Not Available | Negative | 2495295 - 2498438 | 111987.0 |
| multidrug resistance protein acra/acre family | ALQ79_02902 | Not Available | Negative | 2498472 - 2499632 | 40947.9 |
| transcriptional regulatory protein nfxb | ALQ79_02903 | Not Available | Positive | 2499813 - 2500367 | 20181.4 |
| outer membrane receptor protein | ALQ79_05199 | Not Available | Negative | 2500385 - 2502958 | 92790.2 |
| sco1/senc protein | ALQ79_02905 | Not Available | Positive | 2503278 - 2503883 | 22069.7 |
| transporter | ALQ79_02906 | Not Available | Positive | 2503883 - 2504371 | 17138.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







