Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase, m20/m25/m40 family | ALQ79_100245 | Not Available | Negative | 2472140 - 2473612 | 52771.7 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | ALQ79_100149 | Not Available | Negative | 2473564 - 2474577 | 37012.4 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | ALQ79_02883 | Not Available | Negative | 2474574 - 2475575 | 36514.6 |
| peptide abc transporter permease | ALQ79_02884 | Not Available | Negative | 2475592 - 2476500 | 32453.7 |
| nickel/dipeptide/oligopeptide-like abc-type transport system | ALQ79_02885 | Not Available | Negative | 2476509 - 2477426 | 33129.5 |
| extracellular solute-binding protein | ALQ79_02886 | Not Available | Negative | 2477529 - 2479070 | 57050.5 |
| lysr family transcriptional regulator | ALQ79_02887 | Not Available | Positive | 2479255 - 2480163 | 33427.4 |
| gtp cyclohydrolase fole2 | ALQ79_02888 | Not Available | Positive | 2480338 - 2481243 | 32993.4 |
| carbonic anhydrase | ALQ79_02889 | Not Available | Positive | 2481255 - 2481815 | 19956.8 |
| hypothetical protein | ALQ79_02890 | Not Available | Positive | 2481867 - 2483033 | 43908.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







