Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate metabolism protein phnj | ALQ79_02877 | Not Available | Positive | 2461861 - 2462748 | 33229.5 |
| phosphonate metabolism protein phnl | ALQ79_02878 | Not Available | Positive | 2463599 - 2464324 | 26687.3 |
| metal-dependent hydrolase involved in phosphonate metabolism | ALQ79_100292 | Not Available | Positive | 2464318 - 2465463 | 41642.9 |
| ribose 1,5-bisphosphate phosphokinase phnn | ALQ79_02879 | Not Available | Positive | 2465463 - 2466029 | 20927.2 |
| metal-dependent hydrolase of the beta-lactamase superfamily i3b phnp protein | ALQ79_100094 | Not Available | Positive | 2466020 - 2466769 | 27184.8 |
| hypothetical protein | ALQ79_102420 | Not Available | Positive | 2466753 - 2466887 | 5353.84 |
| quinate dehydrogenase | ALQ79_02880 | Not Available | Positive | 2466908 - 2469283 | 84172.1 |
| amidase protein | ALQ79_05192 | Not Available | Negative | 2469346 - 2470869 | 54138.8 |
| hypothetical protein | ALQ79_102364 | Not Available | Positive | 2470642 - 2471211 | 20764.9 |
| peptidase, m20/m25/m40 protein | ALQ79_02882 | Not Available | Negative | 2470992 - 2472143 | 39943.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







