Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine synthase c | ALQ79_01365 | Not Available | Negative | 79165 - 79494 | 12601.3 |
| hypothetical protein | ALQ79_01366 | Not Available | Negative | 79494 - 80234 | 25210.4 |
| penicillin-binding protein 1b | ALQ79_04814 | Not Available | Negative | 80252 - 82573 | 84969.0 |
| uma3 | ALQ79_04813 | Not Available | Positive | 82452 - 84242 | 65936.5 |
| pentapeptide repeat domain protein | ALQ79_01368 | Not Available | Positive | 84329 - 84688 | 13288.8 |
| deoxyribose-phosphate aldolase | ALQ79_04815 | Not Available | Negative | 85041 - 85874 | 30165.5 |
| rieske 2fe-2s protein | ALQ79_101802 | Not Available | Positive | 86035 - 86373 | 12431.7 |
| sugar fermentation stimulation protein -like protein | ALQ79_01370 | Not Available | Negative | 86394 - 87107 | 26440.8 |
| hypothetical protein | ALQ79_04816 | Not Available | Negative | 87107 - 87376 | 9921.76 |
| rna polymerase-binding transcription factor dksa | ALQ79_01371 | Not Available | Positive | 88630 - 89070 | 16978.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







