Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase | ALQ79_02870 | Not Available | Negative | 2450799 - 2452772 | 71880.0 |
| signal transduction protein | ALQ79_02871 | Not Available | Negative | 2452932 - 2453759 | 29111.1 |
| chemotaxis protein | ALQ79_100605 | Not Available | Positive | 2454042 - 2455982 | 69407.9 |
| phosphonates import atp-binding protein phnc | ALQ79_02872 | Not Available | Positive | 2456240 - 2457073 | 30352.8 |
| phosphonate abc transporter periplasmic phosphonate-binding protein | ALQ79_02873 | Not Available | Positive | 2457112 - 2458122 | 36905.8 |
| phosphonate transport protein phne | ALQ79_02874 | Not Available | Positive | 2458151 - 2458939 | 28761.7 |
| phosphonate metabolism transcriptional regulator phnf | ALQ79_101270 | Not Available | Positive | 2458976 - 2459710 | 27480.1 |
| phosphonate metabolism protein phng | ALQ79_100096 | Not Available | Positive | 2459707 - 2460189 | 17754.1 |
| carbon-phosphorus lyase complex subunit | ALQ79_02875 | Not Available | Positive | 2460189 - 2460785 | 21335.5 |
| phosphonate metabolism protein phni | ALQ79_02876 | Not Available | Positive | 2460785 - 2461864 | 39553.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







