Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trat protein | ALQ79_03160 | Not Available | Negative | 2427987 - 2428598 | 22221.0 |
| traq protein | ALQ79_03161 | Not Available | Negative | 2429142 - 2429684 | 18560.6 |
| trap protein | ALQ79_03162 | Not Available | Negative | 2429693 - 2430403 | 25535.5 |
| trao protein | ALQ79_03163 | Not Available | Negative | 2430400 - 2431758 | 47800.4 |
| tran protein | ALQ79_03164 | Not Available | Negative | 2431764 - 2432822 | 36743.6 |
| tram protein | ALQ79_03165 | Not Available | Negative | 2432879 - 2433586 | 26325.4 |
| tral protein | ALQ79_03166 | Not Available | Negative | 2433583 - 2433936 | 12377.7 |
| dna primase trac | ALQ79_05247 | Not Available | Negative | 2433962 - 2438593 | 164986.0 |
| putative type vi secretion system effector, hcp1 family | ALQ79_101824 | Not Available | Positive | 2438689 - 2438910 | 7948.49 |
| hypothetical protein | ALQ79_101332 | Not Available | Positive | 2438934 - 2439452 | 18868.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







