Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase protein | ALQ79_00305 | Not Available | Positive | 2414065 - 2415294 | 46787.1 |
| syringolide biosynthetic protein avrd1 | ALQ79_00306 | Not Available | Positive | 2415652 - 2416587 | 34474.2 |
| hypothetical protein | ALQ79_100762 | Not Available | Positive | 2416929 - 2417576 | 23872.7 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | ALQ79_100399 | Not Available | Positive | 2419678 - 2420937 | 45425.8 |
| putative sanc | ALQ79_00307 | Not Available | Positive | 2420974 - 2421630 | 24805.2 |
| hypothetical protein | ALQ79_00308 | Not Available | Positive | 2421630 - 2422208 | 22131.8 |
| hypothetical protein | ALQ79_02711 | Not Available | Negative | 2422494 - 2423207 | 27995.9 |
| traw | ALQ79_101066 | Not Available | Negative | 2423461 - 2424689 | 43220.9 |
| hypothetical protein | ALQ79_03158 | Not Available | Negative | 2424696 - 2424932 | 8734.33 |
| hypothetical protein | ALQ79_05245 | Not Available | Negative | 2424956 - 2428099 | 116372.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







