Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_01061 | Not Available | Negative | 2319764 - 2320102 | 12543.8 |
| rna polymerase-associated protein rapa | ALQ79_01062 | Not Available | Positive | 2320338 - 2323184 | 106620.0 |
| hypothetical protein | ALQ79_03007 | Not Available | Positive | 2323896 - 2324033 | 4911.7 |
| plasmid conjugative transfer endonuclease | ALQ79_100564 | Not Available | Negative | 2324303 - 2324821 | 18811.5 |
| hypothetical protein | ALQ79_100740 | Not Available | Negative | 2324818 - 2325471 | 23806.6 |
| type iv pilus bioproteinsis protein | ALQ79_02182 | Not Available | Negative | 2325600 - 2325932 | 12914.7 |
| hypothetical protein | ALQ79_04391 | Not Available | Positive | 2326227 - 2326418 | 7368.21 |
| udp-n-acetylglucosamine 2-epimerase | ALQ79_04392 | Not Available | Positive | 2326650 - 2327945 | 47893.0 |
| hypothetical protein | ALQ79_04393 | Not Available | Positive | 2328112 - 2330325 | 78356.4 |
| bacteriophage n4 adsorption protein b | ALQ79_04394 | Not Available | Positive | 2330338 - 2332458 | 81518.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







