Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_04725 | Not Available | Negative | 2289433 - 2290143 | 26139.7 |
| hypothetical protein | ALQ79_01045 | Not Available | Negative | 2290147 - 2290323 | 6384.1 |
| poly | ALQ79_01046 | Not Available | Positive | 2290577 - 2295409 | 166562.0 |
| hypothetical protein | ALQ79_102020 | Not Available | Negative | 2295459 - 2295596 | 4629.34 |
| hypothetical protein | ALQ79_01047 | Not Available | Negative | 2295712 - 2296026 | 11505.0 |
| lysr family transcriptional regulator | ALQ79_01048 | Not Available | Positive | 2296094 - 2297017 | 33931.7 |
| 3-oxoadipate enol-lactonase | ALQ79_01049 | Not Available | Positive | 2297031 - 2297819 | 29517.9 |
| peptidyl-prolyl cis-trans isomerase | ALQ79_01050 | Not Available | Positive | 2297958 - 2298521 | 20245.4 |
| abc transporter atp-binding/permease protein | ALQ79_01051 | Not Available | Positive | 2298624 - 2300456 | 67767.5 |
| hypothetical protein | ALQ79_01052 | Not Available | Negative | 2300728 - 2301855 | 42650.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







