Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator/sensory box/ggdef domain/eal domain-containing protein | ALQ79_02534 | Not Available | Negative | 2258472 - 2260610 | 79367.4 |
| alginate lyase | ALQ79_02535 | Not Available | Positive | 2260925 - 2261596 | 25225.4 |
| sodium/proline symporter | ALQ79_02536 | Not Available | Negative | 2261695 - 2263182 | 52801.3 |
| trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase | ALQ79_02537 | Not Available | Positive | 2263631 - 2267584 | 142926.0 |
| acyl-coa dehydrogenase protein | ALQ79_02538 | Not Available | Positive | 2267601 - 2269613 | 74475.8 |
| hypothetical protein | ALQ79_05104 | Not Available | Negative | 2269635 - 2272292 | 99471.2 |
| hypothetical protein | ALQ79_101098 | Not Available | Negative | 2272360 - 2272533 | 6241.3 |
| k antiporter nhap2 | ALQ79_02540 | Not Available | Positive | 2272781 - 2274523 | 61363.9 |
| hypothetical protein | ALQ79_02541 | Not Available | Positive | 2274562 - 2277951 | 125596.0 |
| biotin carboxylase/biotin carboxyl carrier protein | ALQ79_02542 | Not Available | Negative | 2278021 - 2279754 | 61609.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







