Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | ALQ79_04956 | Not Available | Negative | 2192571 - 2194283 | 60856.7 |
| sensor histidine kinase | ALQ79_01967 | Not Available | Negative | 2194376 - 2195695 | 48690.2 |
| dna-binding response regulator | ALQ79_01968 | Not Available | Negative | 2195692 - 2196360 | 24622.4 |
| peptidase propeptide and ypeb domain protein | ALQ79_01969 | Not Available | Negative | 2196360 - 2196668 | 11783.2 |
| putative lipoprotein | ALQ79_01970 | Not Available | Negative | 2196668 - 2196976 | 11374.5 |
| 6-carboxy-5,6,7,8-tetrahydropterin synthase | ALQ79_01971 | Not Available | Positive | 2197191 - 2197547 | 13645.2 |
| glutaredoxin | ALQ79_01575 | Not Available | Negative | 2197732 - 2198082 | 13079.0 |
| nucleoid-associated protein | ALQ79_01576 | Not Available | Negative | 2198088 - 2199134 | 39082.0 |
| hu family dna-binding protein hu-nu | ALQ79_01577 | Not Available | Positive | 2199483 - 2199764 | 9801.98 |
| ribosomal rna large subunit methyltransferase f | ALQ79_04860 | Not Available | Negative | 2200129 - 2201163 | 38044.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







