Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit clpa | ALQ79_04951 | Not Available | Negative | 2159732 - 2162005 | 83536.9 |
| atp-dependent clp protease adapter protein clps | ALQ79_01941 | Not Available | Negative | 2162036 - 2162398 | 13547.1 |
| cold shock domain-containing protein cspd | ALQ79_01942 | Not Available | Positive | 2162612 - 2162896 | 10239.2 |
| isocitrate dehydrogenase, proteinp-dependent | ALQ79_01943 | Not Available | Positive | 2163462 - 2165693 | 80964.3 |
| mutt/nudix protein | ALQ79_01944 | Not Available | Positive | 2165836 - 2166282 | 16860.9 |
| pp_02054 | ALQ79_01945 | Not Available | Positive | 2166343 - 2167473 | Not Available |
| high frequency lysogenization protein hfld -like protein | ALQ79_01946 | Not Available | Positive | 2167473 - 2168093 | 22997.1 |
| glutathione s-transferase protein | ALQ79_100823 | Not Available | Negative | 2168072 - 2168221 | 5414.33 |
| adenylosuccinate lyase | ALQ79_01947 | Not Available | Positive | 2168225 - 2169595 | 50901.0 |
| ycfd protein | ALQ79_01948 | Not Available | Positive | 2169608 - 2170822 | 45777.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







