Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 2142870 - 2142957 | Not Available |
| lysr family transcriptional regulator | ALQ79_04947 | Not Available | Positive | 2143101 - 2144009 | 33299.6 |
| abc transporter periplasmic substrate-binding protein | ALQ79_01922 | Not Available | Negative | 2143995 - 2144774 | 27430.4 |
| citrate-proton symporter | ALQ79_01923 | Not Available | Negative | 2144789 - 2146090 | 46676.7 |
| trna 5-methylaminomethyl-2-thiouridine synthase tusd | ALQ79_01924 | Not Available | Positive | 2146199 - 2146717 | 18941.6 |
| sulfur relay protein tusc | ALQ79_01925 | Not Available | Positive | 2146719 - 2147081 | 12979.5 |
| dsrh protein | ALQ79_01926 | Not Available | Positive | 2147081 - 2147380 | 10900.2 |
| sulfurtransferase | ALQ79_01927 | Not Available | Positive | 2147377 - 2147712 | 12213.8 |
| hypothetical protein | ALQ79_01928 | Not Available | Positive | 2147709 - 2148710 | 37094.6 |
| glutathione s-transferase domain-containing protein | ALQ79_01929 | Not Available | Positive | 2148819 - 2149817 | 37790.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







