Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, lysr:lysr, substrate-binding | ALQ79_01913 | Not Available | Positive | 2130748 - 2131680 | 33862.7 |
| aldehyde dehydrogenase protein | ALQ79_01914 | Not Available | Positive | 2131954 - 2133537 | 55651.8 |
| hypothetical protein | ALQ79_102358 | Not Available | Positive | 2133770 - 2133895 | 4721.68 |
| n-methyltryptophan oxidase | ALQ79_01915 | Not Available | Positive | 2133970 - 2135145 | 42607.4 |
| abc transporter permease | ALQ79_01916 | Not Available | Negative | 2135156 - 2136505 | 50163.0 |
| type i secretion membrane fusion protein, hlyd | ALQ79_01917 | Not Available | Negative | 2136507 - 2137844 | 48687.2 |
| type i secretion system atpase, prtd | ALQ79_01918 | Not Available | Negative | 2137841 - 2139637 | 64306.2 |
| serralysin | ALQ79_01919 | Not Available | Negative | 2140159 - 2140812 | 21706.9 |
| serralysin | ALQ79_01920 | Not Available | Negative | 2140828 - 2141589 | 26999.5 |
| putative membrane protein | ALQ79_01921 | Not Available | Negative | 2142076 - 2142783 | 25596.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







