Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | ALQ79_03955 | Not Available | Negative | 2068436 - 2069599 | 42497.7 |
| chorismate synthase | ALQ79_05466 | Not Available | Negative | 2069630 - 2070754 | 40406.3 |
| hypothetical protein | ALQ79_03957 | Not Available | Positive | 2070863 - 2071891 | 36728.7 |
| hypothetical protein | ALQ79_03958 | Not Available | Positive | 2071993 - 2072796 | 30647.6 |
| 50s ribosomal protein l3 glutamine methyltransferase | ALQ79_03959 | Not Available | Negative | 2072841 - 2073755 | 34350.6 |
| isochorismatase protein | ALQ79_03960 | Not Available | Positive | 2074012 - 2074602 | 21246.8 |
| hypothetical protein | ALQ79_03961 | Not Available | Positive | 2074752 - 2075069 | 11262.0 |
| smr domain protein | ALQ79_03962 | Not Available | Positive | 2075115 - 2075672 | 20889.2 |
| gtp cyclohydrolase 1 | ALQ79_05467 | Not Available | Positive | 2076016 - 2076666 | 23842.4 |
| glutaredoxin | ALQ79_03964 | Not Available | Positive | 2076742 - 2077119 | 14243.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







