Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_04258 | Not Available | Negative | 2005039 - 2006169 | 41969.5 |
| 50s ribosomal protein l31 type b | ALQ79_04259 | Not Available | Positive | 2006464 - 2006745 | 10228.8 |
| d-alanine--d-alanine ligase | ALQ79_04260 | Not Available | Positive | 2006898 - 2007989 | 39107.1 |
| mutt/nudix protein | ALQ79_100216 | Not Available | Positive | 2007986 - 2008396 | 14943.2 |
| transcriptional activator metr | ALQ79_04261 | Not Available | Negative | 2008435 - 2009388 | 35370.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | ALQ79_04262 | Not Available | Positive | 2009459 - 2010193 | 27538.1 |
| alpha/beta hydrolase fold protein | ALQ79_04263 | Not Available | Positive | 2010305 - 2011309 | 36416.7 |
| 2-hydroxychromene-2-carboxylate isomerase protein | ALQ79_04264 | Not Available | Positive | 2011391 - 2012038 | 24183.5 |
| sigma-54 dependent dna-binding response regulator | ALQ79_04265 | Not Available | Negative | 2012170 - 2013498 | 48858.4 |
| sensor histidine kinase | ALQ79_05552 | Not Available | Negative | 2013514 - 2013960 | 15823.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







