Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | ALQ79_03137 | Not Available | Positive | 1987979 - 1988959 | 35158.2 |
| glycosyl transferase, group 4 protein | ALQ79_03138 | Not Available | Positive | 1988952 - 1989968 | 36563.4 |
| nucleotide sugar epimerase/dehydratase wbpm | ALQ79_03139 | Not Available | Positive | 1990065 - 1992062 | 73813.7 |
| competence protein comea helix-hairpin-helix repeat region | ALQ79_03140 | Not Available | Positive | 1992222 - 1992569 | 12169.5 |
| transcriptional regulator, tetr family | ALQ79_03141 | Not Available | Negative | 1992674 - 1993282 | 22408.9 |
| threonine/serine transporter | ALQ79_03142 | Not Available | Positive | 1993687 - 1994964 | 46095.6 |
| hypothetical protein | ALQ79_03143 | Not Available | Negative | 1995037 - 1995243 | 8003.46 |
| hypothetical protein | ALQ79_05238 | Not Available | Negative | 1995367 - 1995849 | 17391.5 |
| hypothetical protein | ALQ79_03145 | Not Available | Negative | 1995853 - 1996251 | 14905.7 |
| hypothetical protein | ALQ79_03146 | Not Available | Positive | 1996402 - 1997538 | 43235.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







