Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin domain-containing protein | ALQ79_03120 | Not Available | Positive | 1963581 - 1964213 | 22791.2 |
| abc transporter, atp-binding/permease protein | ALQ79_100060 | Not Available | Positive | 1964206 - 1966032 | 66487.5 |
| sensory box protein | ALQ79_03121 | Not Available | Positive | 1966147 - 1968618 | 91323.1 |
| hypothetical protein | ALQ79_03122 | Not Available | Positive | 1968648 - 1969433 | 29925.8 |
| ggdef domain-containing protein | ALQ79_03123 | Not Available | Negative | 1969463 - 1970407 | 35447.7 |
| putative oxoacyl- reductase | ALQ79_03124 | Not Available | Negative | 1970604 - 1971344 | 26272.5 |
| phosphoglycolate phosphatase | ALQ79_03125 | Not Available | Negative | 1971357 - 1972028 | 24601.7 |
| ubiquinone biosynthesis o-methyltransferase | ALQ79_03126 | Not Available | Negative | 1972032 - 1972730 | 25949.2 |
| n-ethylammeline chlorohydrolase | ALQ79_05234 | Not Available | Negative | 1972816 - 1974177 | 49012.9 |
| methylthioribose-1-phosphate isomerase | ALQ79_03128 | Not Available | Positive | 1974247 - 1975344 | 39996.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







