Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp pyrophosphokinase | ALQ79_03083 | Not Available | Positive | 1926519 - 1928762 | 83900.9 |
| hypothetical protein | ALQ79_03085 | Not Available | Positive | 1929654 - 1930193 | 20381.4 |
| hypothetical protein | ALQ79_03086 | Not Available | Negative | 1930277 - 1930456 | 6785.79 |
| hypothetical protein | ALQ79_03087 | Not Available | Negative | 1930927 - 1931640 | 26302.3 |
| phosphoribosylglycinamide formyltransferase | ALQ79_03088 | Not Available | Negative | 1931649 - 1932299 | 23573.4 |
| phosphoribosylformylglycinamidine cyclo-ligase | ALQ79_03089 | Not Available | Negative | 1932299 - 1933357 | 36925.9 |
| hypothetical protein | ALQ79_101861 | Not Available | Negative | 1933416 - 1933700 | 10922.2 |
| hypothetical protein | ALQ79_03090 | Not Available | Positive | 1933699 - 1934802 | 38607.8 |
| permease | ALQ79_03091 | Not Available | Positive | 1934835 - 1935914 | 38786.4 |
| dnaa protein | ALQ79_100344 | Not Available | Positive | 1936051 - 1936836 | 29632.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







