Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiocytidine biosynthesis protein ttca | ALQ79_05229 | Not Available | Positive | 1916615 - 1917439 | 31128.8 |
| dna-3-methyladenine glycosylase | ALQ79_05230 | Not Available | Negative | 1917446 - 1918186 | 28094.0 |
| flavoprotein wrba | ALQ79_03077 | Not Available | Negative | 1918220 - 1918825 | 21166.4 |
| arsenate reductase | ALQ79_03078 | Not Available | Negative | 1918822 - 1919181 | 13177.1 |
| tlpa-like protein-disulfide reductase | ALQ79_100436 | Not Available | Positive | 1919305 - 1919772 | 16901.3 |
| hypothetical protein | ALQ79_102374 | Not Available | Positive | 1919830 - 1920033 | 7501.9 |
| hypothetical protein | ALQ79_03079 | Not Available | Negative | 1920165 - 1920989 | 30724.8 |
| response regulator, sensor histidine kinase component gacs | ALQ79_03080 | Not Available | Negative | 1921099 - 1923852 | 100219.0 |
| cysteine synthase | ALQ79_03081 | Not Available | Positive | 1924066 - 1925007 | 33845.4 |
| 23s rrna -methyltransferase rlmd | ALQ79_03082 | Not Available | Positive | 1925007 - 1926362 | 49419.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







