Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | ALQ79_100331 | Not Available | Positive | 37667 - 37879 | 7685.02 |
| putative lipoprotein | ALQ79_100454 | Not Available | Negative | 37945 - 38292 | 11743.8 |
| hypothetical protein | ALQ79_01770 | Not Available | Positive | 38602 - 38796 | 6875.35 |
| inosine/uridine-preferring nucleoside hydrolase | ALQ79_04898 | Not Available | Negative | 38824 - 39903 | 39112.2 |
| d-ribose pyranase | ALQ79_01772 | Not Available | Negative | 39872 - 40276 | 14521.9 |
| ribokinase | ALQ79_100983 | Not Available | Negative | 40273 - 41193 | 31180.2 |
| ribose operon repressor | ALQ79_04899 | Not Available | Negative | 41224 - 42240 | 36415.0 |
| ribose abc transporter, permease protein | ALQ79_01774 | Not Available | Negative | 42242 - 43234 | 34330.9 |
| ribose abc transporter atp-binding protein | ALQ79_04900 | Not Available | Negative | 43231 - 44811 | 57294.4 |
| ribose abc transporter periplasmic ribose-binding protein | ALQ79_04901 | Not Available | Negative | 44838 - 45884 | 37220.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







