Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase family site specific recombinase | ALQ79_02250 | Not Available | Positive | 1867058 - 1869199 | 80193.5 |
| avrppig1 protein | ALQ79_101047 | Not Available | Negative | 1869365 - 1870591 | 45931.0 |
| rulb protein | ALQ79_02251 | Not Available | Positive | 1870625 - 1871653 | 38334.7 |
| hypothetical protein | ALQ79_02252 | Not Available | Positive | 1872527 - 1873438 | 34523.6 |
| hypothetical protein | ALQ79_02253 | Not Available | Negative | 1873453 - 1874424 | 34607.2 |
| hypothetical protein | ALQ79_02638 | Not Available | Negative | 1874556 - 1874765 | 7767.14 |
| hypothetical protein | ALQ79_02639 | Not Available | Negative | 1874854 - 1875306 | 16747.3 |
| hypothetical protein | ALQ79_200094 | Not Available | Positive | 1875328 - 1875585 | 9342.13 |
| hypothetical protein | ALQ79_200414 | Not Available | Positive | 1875680 - 1876042 | 13690.0 |
| hypothetical protein | ALQ79_200575 | Not Available | Negative | 1876203 - 1876673 | 17842.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







